Showing : repeated measures • reset
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Time series experiment analysis in DEseq2 without T=0 and three independent experiments with linked samples
deseq2 rnaseq repeated measures time series design formula
updated 4.3 years ago by 42k • written 4.3 years ago by ▴ 10
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DESeq2 for repeated/clustered samples
deseq2 repeated measures
updated 4.4 years ago by 42k • written 4.4 years ago by • 0
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dream vignette says limma-voom repeated measures two-group comparison needs two duplicateCorrelation rounds which differs from limma user's guide and…
dream variancePartition limma differential expression repeated measures
updated 4.6 years ago by 50k • written 4.6 years ago by ▴ 20
2
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5
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SVA for repeated measures design
SVA deseq2 repeated measures
updated 4.6 years ago by ★ 3.3k • written 4.6 years ago by • 0
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Incorporating subject ID as random effect for repeated measures RNA-Seq analysis
limma rna-seq mixed model repeated measures
updated 5.7 years ago by 50k • written 5.7 years ago by ▴ 270
3
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Repeated Measures, Within-Subject, Between-Groups RNAseq Analysis
edgeR rnaseq repeated measures
updated 6.1 years ago by ★ 7.9k • written 6.1 years ago by • 0
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DESeq2 - How to study time course experiment taking subject variability into account?
deseq2 repeated measures time course
updated 6.3 years ago by 42k • written 6.3 years ago by • 0
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LIMMA: interpreting interaction terms in an unbalanced factorial design with repeated measures
LIMMA FACTORIAL REPEATED MEASURES differential gene expression
8.7 years ago • updated 8.6 years ago robert.maughan • 0
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Model in metagenomeSeq
repeated measures
8.6 years ago PJ • 0
9 results • Page 1 of 1
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Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db") by Patadù ▴ 10
Hi @marcelramos Thanks for the clarification. Yes, I have installed `org.Vdahlaie.eg.db` using the code you and Guido suggested and now i…
Comment: European Bioconductor Conference 2023 planning by angelaesper43 • 0
@Maria Doyle[sexdolltech][1]Hosting EuroBioC provides an excellent opportunity to showcase Bioconductor and computational biology research …
Comment: Ensembl plants at annotationHub? by Johannes Rainer ★ 2.0k
Dear Daniele, for which Ensembl release would you need the data? the most recent is 112, but if you used a different version before it wou…
Comment: Ensembl plants at annotationHub? by Daniele • 0
Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools by BioinfGuru ▴ 30
Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
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